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Phylogenetic
Software
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MEGA
free
3,141
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, and Kumar S
MEGA is an integrated tool for conducting automatic and manual sequence alignment, inferring phylogenetic...
manual sequence alignment, inferring
phylogenetic
trees, mining web-based
Geneious
2,083
Biomatters Ltd.
Geneious is a research tool designed for biologists and not computer...
Geneious is a research tool designed for biologists and not computer scientists
CLC Sequence Viewer
free
1,964
QIAGEN
CLC Sequence Viewer features Full integration of data input, data management...
interactive restriction site analysis,
phylogenetics
, or advanced
TreeView
free
1,962
Roderic D. M. Page
TreeView is a program to view phylogenetic trees in your computer. It can read and display...
to view
phylogenetic
trees in your computer. A
phylogenetic
TreeView X
free
1,578
Roderic D. M. Page
TreeView X is an open source program to display phylogenetic trees on Linux, Unix, Mac OS X, and Windows platforms...
source program to display
phylogenetic
trees on Linux, Unix
Unipro UGENE
free
1,302
Unipro, Russia
UGENE is a free cross-platform genome analysis suite. It works perfectly on Windows, Mac OS or Linux and requires...
IV and PSIPRED; -
Phylogenetic
analysis with Phylip...stereo mode support; -
Phylogenetic
Mesquite
free
402
Mesquite Project
Mesquite is modular, extendible application for evolutionary biology, designed to help biologists...
emphasis is on
phylogenetic
analysis ...others do non-
phylogenetic
multivariate analysis. Mesquite
Dendroscope
free
310
Daniel H. Huson
Dendroscope is a platform-independent app written in Java...
enables conveniently to browse
phylogenetic
trees and networks
SplitsTree4
free
127
Center for Bioinformatics Tübingen
Given an alignment of sequences, a distance matrix or a set of trees, the program will compute...
for computing unrooted
phylogenetic
networks...will compute a
phylogenetic
tree or network
PaupUp
free
80
Jean-Francois Martin
PauUP program was developed to provide a user-friendly interface to the phylogenetic program PAUP* on Windows operating...
friendly interface to the
phylogenetic
program PAUP*
PAUP*
41
David Swofford
PAUP* is a new release of the software package for inference of evolutionary trees...
to infer
phylogenetic
relationships...comprehensive introduction to
phylogenetic
NeXplorer
free
41
astoltzfus, vivekgopalan
Nexplorer is a web-based phylogenetic browser, used to view and edit comparative data...
Nexplorer is a web-based
phylogenetic
browser
Open DELTA Suite
free
41
moyesyside
The DELTA system is a flexible data-coding format for taxonomic descriptions, and an associated set of programs...
to formats required for
phylogenetic
and phenetic
EZEditor
free
22
Chunlab Inc.
EzEditor is a Java-based sequence alignment editor allowing manipulation...
sequence alignments for
phylogenetic
analysis...alignment and subsequent
phylogenetic
TreeMe
18
SequentiX - Digital DNA Processing
TreeMe allows visualization, editing, and annotation of large phylogenetic...
and annotation of large
phylogenetic
trees
1
2
Tags
Phylogenetic trees
Data
Analysis
Sequence
Phylogenetic tree
Matrix
Treeview
Bioinformatics
Mega
Data analysis